Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fam43aQ8BUP8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fam43aQ8BUP8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Fam43aQ8BUP8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Smad6-203ENSMUST00000179458 273 ntBASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Serp2-204ENSMUST00000228055 705 ntBASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam43aQ8BUP8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam43aQ8BUP8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam43aQ8BUP8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam43aQ8BUP8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Fam43aQ8BUP8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fam43aQ8BUP8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam43aQ8BUP8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms