Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm15039-201ENSMUST00000118914 875 ntBASIC18.79■□□□□ 0.6
Usp43Q8BUM9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Usp43Q8BUM9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp43Q8BUM9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp43Q8BUM9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Usp43Q8BUM9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp43Q8BUM9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp43Q8BUM9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp43Q8BUM9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp43Q8BUM9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp43Q8BUM9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp43Q8BUM9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp43Q8BUM9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.77■□□□□ 0.59
Usp43Q8BUM9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp43Q8BUM9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Gm42569-201ENSMUST00000200539 472 ntBASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp43Q8BUM9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp43Q8BUM9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp43Q8BUM9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp43Q8BUM9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp43Q8BUM9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms