Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.77■□□□□ 0.6
Sfr1Q8BP27 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sfr1Q8BP27 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sfr1Q8BP27 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sfr1Q8BP27 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sfr1Q8BP27 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.77■□□□□ 0.59
Sfr1Q8BP27 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sfr1Q8BP27 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sfr1Q8BP27 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Mir5133-201ENSMUST00000174955 77 ntBASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sfr1Q8BP27 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sfr1Q8BP27 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Gm10602-201ENSMUST00000098239 609 ntBASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sfr1Q8BP27 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms