Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cdhr3Q8BL00 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Gm8493-201ENSMUST00000196881 489 ntBASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdhr3Q8BL00 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdhr3Q8BL00 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdhr3Q8BL00 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdhr3Q8BL00 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdhr3Q8BL00 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms