Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Clrn3Q8BHH8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn3Q8BHH8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn3Q8BHH8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.33■□□□□ 0.37
Clrn3Q8BHH8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clrn3Q8BHH8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Clrn3Q8BHH8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clrn3Q8BHH8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Gm18671-201ENSMUST00000214826 683 ntBASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clrn3Q8BHH8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Gm8495-201ENSMUST00000188740 694 ntBASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Gm42642-201ENSMUST00000200683 355 ntBASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.3■□□□□ 0.36
Clrn3Q8BHH8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clrn3Q8BHH8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms