Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.07■□□□□ 0.48
Trim50Q810I2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim50Q810I2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim50Q810I2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim50Q810I2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim50Q810I2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim50Q810I2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.07■□□□□ 0.48
Trim50Q810I2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim50Q810I2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim50Q810I2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.06■□□□□ 0.48
Trim50Q810I2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim50Q810I2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim50Q810I2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim50Q810I2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim50Q810I2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim50Q810I2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim50Q810I2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Gm7514-201ENSMUST00000209475 934 ntBASIC18.05■□□□□ 0.48
Trim50Q810I2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.05■□□□□ 0.48
Trim50Q810I2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim50Q810I2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim50Q810I2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim50Q810I2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim50Q810I2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim50Q810I2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim50Q810I2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim50Q810I2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim50Q810I2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trim50Q810I2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.03■□□□□ 0.48
Trim50Q810I2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim50Q810I2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim50Q810I2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim50Q810I2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.02■□□□□ 0.48
Trim50Q810I2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim50Q810I2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms