Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.67■□□□□ 0.1
Upk3bQ80YF6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk3bQ80YF6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Upk3bQ80YF6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Upk3bQ80YF6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Upk3bQ80YF6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Gm43137-201ENSMUST00000198052 594 ntBASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Upk3bQ80YF6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Upk3bQ80YF6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Upk3bQ80YF6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms