Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.86■□□□□ 0.45
Trim36Q80WG7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim36Q80WG7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim36Q80WG7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.85■□□□□ 0.45
Trim36Q80WG7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.85■□□□□ 0.45
Trim36Q80WG7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.85■□□□□ 0.45
Trim36Q80WG7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Trim36Q80WG7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim36Q80WG7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim36Q80WG7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim36Q80WG7 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.83■□□□□ 0.45
Trim36Q80WG7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim36Q80WG7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.83■□□□□ 0.44
Trim36Q80WG7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.83■□□□□ 0.44
Trim36Q80WG7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim36Q80WG7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Gm11421-201ENSMUST00000122124 294 ntBASIC17.82■□□□□ 0.44
Trim36Q80WG7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim36Q80WG7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.82■□□□□ 0.44
Trim36Q80WG7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.82■□□□□ 0.44
Trim36Q80WG7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.82■□□□□ 0.44
Trim36Q80WG7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim36Q80WG7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.81■□□□□ 0.44
Trim36Q80WG7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.81■□□□□ 0.44
Trim36Q80WG7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim36Q80WG7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.8■□□□□ 0.44
Trim36Q80WG7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim36Q80WG7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms