Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim62Q80V85 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim62Q80V85 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Gm13148-201ENSMUST00000118892 745 ntBASIC19.19■□□□□ 0.66
Trim62Q80V85 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim62Q80V85 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim62Q80V85 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim62Q80V85 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim62Q80V85 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.19■□□□□ 0.66
Trim62Q80V85 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim62Q80V85 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.19■□□□□ 0.66
Trim62Q80V85 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim62Q80V85 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trim62Q80V85 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.18■□□□□ 0.66
Trim62Q80V85 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim62Q80V85 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim62Q80V85 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.18■□□□□ 0.66
Trim62Q80V85 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim62Q80V85 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.17■□□□□ 0.66
Trim62Q80V85 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.17■□□□□ 0.66
Trim62Q80V85 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trim62Q80V85 Gm5408-201ENSMUST00000197998 747 ntBASIC19.17■□□□□ 0.66
Trim62Q80V85 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.17■□□□□ 0.66
Trim62Q80V85 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim62Q80V85 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim62Q80V85 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim62Q80V85 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim62Q80V85 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim62Q80V85 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim62Q80V85 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim62Q80V85 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim62Q80V85 Gm26524-201ENSMUST00000192339 390 ntBASIC19.16■□□□□ 0.66
Trim62Q80V85 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.16■□□□□ 0.66
Trim62Q80V85 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim62Q80V85 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim62Q80V85 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim62Q80V85 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.15■□□□□ 0.66
Trim62Q80V85 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Trim62Q80V85 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim62Q80V85 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim62Q80V85 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim62Q80V85 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim62Q80V85 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim62Q80V85 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim62Q80V85 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim62Q80V85 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim62Q80V85 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim62Q80V85 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim62Q80V85 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim62Q80V85 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim62Q80V85 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Gm22325-201ENSMUST00000158904 308 ntBASIC19.13■□□□□ 0.65
Trim62Q80V85 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim62Q80V85 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Rab3c-203ENSMUST00000224180 967 ntBASIC19.13■□□□□ 0.65
Trim62Q80V85 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.13■□□□□ 0.65
Trim62Q80V85 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim62Q80V85 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trim62Q80V85 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Trim62Q80V85 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim62Q80V85 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms