Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh8Q7TSK3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh8Q7TSK3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh8Q7TSK3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh8Q7TSK3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh8Q7TSK3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh8Q7TSK3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh8Q7TSK3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh8Q7TSK3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdh8Q7TSK3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms