Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Mir6982-201ENSMUST00000184354 68 ntBASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Npc1l1Q6T3U4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Gm12896-201ENSMUST00000118430 226 ntBASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Npc1l1Q6T3U4 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Npc1l1Q6T3U4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Npc1l1Q6T3U4 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Npc1l1Q6T3U4 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Npc1l1Q6T3U4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.24■■□□□ 1.15
Npc1l1Q6T3U4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Npc1l1Q6T3U4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Npc1l1Q6T3U4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Npc1l1Q6T3U4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Npc1l1Q6T3U4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Npc1l1Q6T3U4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Npc1l1Q6T3U4 Gm44549-201ENSMUST00000208351 577 ntBASIC22.22■■□□□ 1.15
Npc1l1Q6T3U4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 181.9 ms