Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.78■□□□□ 0.76
CtifQ6PEE2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.78■□□□□ 0.76
CtifQ6PEE2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.78■□□□□ 0.76
CtifQ6PEE2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CtifQ6PEE2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CtifQ6PEE2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.77■□□□□ 0.76
CtifQ6PEE2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CtifQ6PEE2 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.77■□□□□ 0.75
CtifQ6PEE2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.76■□□□□ 0.75
CtifQ6PEE2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.76■□□□□ 0.75
CtifQ6PEE2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CtifQ6PEE2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CtifQ6PEE2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.75■□□□□ 0.75
CtifQ6PEE2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.74■□□□□ 0.75
CtifQ6PEE2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CtifQ6PEE2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CtifQ6PEE2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CtifQ6PEE2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.73■□□□□ 0.75
CtifQ6PEE2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CtifQ6PEE2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtifQ6PEE2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtifQ6PEE2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.71■□□□□ 0.74
CtifQ6PEE2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtifQ6PEE2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 597.3 ms