Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC24.47■■□□□ 1.51
Chd4Q6PDQ2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Chd4Q6PDQ2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Chd4Q6PDQ2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC24.47■■□□□ 1.51
Chd4Q6PDQ2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC24.47■■□□□ 1.51
Chd4Q6PDQ2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Chd4Q6PDQ2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC24.46■■□□□ 1.51
Chd4Q6PDQ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC24.46■■□□□ 1.51
Chd4Q6PDQ2 Gm7977-201ENSMUST00000193787 748 ntBASIC24.46■■□□□ 1.51
Chd4Q6PDQ2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Chd4Q6PDQ2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Chd4Q6PDQ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC24.45■■□□□ 1.51
Chd4Q6PDQ2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Chd4Q6PDQ2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Gm44544-201ENSMUST00000207052 1844 ntBASIC24.45■■□□□ 1.5
Chd4Q6PDQ2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Chd4Q6PDQ2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Gm15375-201ENSMUST00000119510 849 ntBASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Chd4Q6PDQ2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chd4Q6PDQ2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Chd4Q6PDQ2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Gm12382-201ENSMUST00000122005 922 ntBASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Chd4Q6PDQ2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Gm5417-201ENSMUST00000079706 384 ntBASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Chd4Q6PDQ2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Chd4Q6PDQ2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Chd4Q6PDQ2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Chd4Q6PDQ2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Gm37292-201ENSMUST00000192062 758 ntBASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Gm38285-201ENSMUST00000192928 922 ntBASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chd4Q6PDQ2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chd4Q6PDQ2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms