Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Mir6349-201ENSMUST00000184059 97 ntBASIC20.25■□□□□ 0.83
ShbQ6PD21 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ShbQ6PD21 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ShbQ6PD21 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ShbQ6PD21 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ShbQ6PD21 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ShbQ6PD21 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.24■□□□□ 0.83
ShbQ6PD21 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.24■□□□□ 0.83
ShbQ6PD21 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Gm17971-201ENSMUST00000190239 806 ntBASIC20.24■□□□□ 0.83
ShbQ6PD21 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ShbQ6PD21 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.24■□□□□ 0.83
ShbQ6PD21 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ShbQ6PD21 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ShbQ6PD21 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.23■□□□□ 0.83
ShbQ6PD21 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ShbQ6PD21 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
ShbQ6PD21 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.23■□□□□ 0.83
ShbQ6PD21 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.22■□□□□ 0.83
ShbQ6PD21 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.22■□□□□ 0.83
ShbQ6PD21 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.22■□□□□ 0.83
ShbQ6PD21 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.22■□□□□ 0.83
ShbQ6PD21 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ShbQ6PD21 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.21■□□□□ 0.83
ShbQ6PD21 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
ShbQ6PD21 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ShbQ6PD21 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ShbQ6PD21 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Mir5130-201ENSMUST00000175160 84 ntBASIC20.21■□□□□ 0.83
ShbQ6PD21 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.21■□□□□ 0.83
ShbQ6PD21 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ShbQ6PD21 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ShbQ6PD21 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.2■□□□□ 0.82
ShbQ6PD21 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ShbQ6PD21 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShbQ6PD21 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShbQ6PD21 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.2■□□□□ 0.82
ShbQ6PD21 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShbQ6PD21 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.2■□□□□ 0.82
ShbQ6PD21 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ShbQ6PD21 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShbQ6PD21 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
ShbQ6PD21 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShbQ6PD21 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ShbQ6PD21 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShbQ6PD21 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.19■□□□□ 0.82
ShbQ6PD21 Gm17661-201ENSMUST00000170317 270 ntBASIC20.19■□□□□ 0.82
ShbQ6PD21 Gm27463-201ENSMUST00000183569 57 ntBASIC20.19■□□□□ 0.82
ShbQ6PD21 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShbQ6PD21 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ShbQ6PD21 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms