Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smarcd3Q6P9Z1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd3Q6P9Z1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Gm27801-201ENSMUST00000184174 223 ntBASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd3Q6P9Z1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Gm8493-201ENSMUST00000196881 489 ntBASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd3Q6P9Z1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd3Q6P9Z1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcd3Q6P9Z1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Gm43173-201ENSMUST00000202246 593 ntBASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.95■□□□□ 0.3
Smarcd3Q6P9Z1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcd3Q6P9Z1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smarcd3Q6P9Z1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms