Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abcf1Q6P542 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Abcf1Q6P542 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.69■□□□□ 0.9
Abcf1Q6P542 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Abcf1Q6P542 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.68■□□□□ 0.9
Abcf1Q6P542 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Abcf1Q6P542 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.67■□□□□ 0.9
Abcf1Q6P542 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abcf1Q6P542 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Abcf1Q6P542 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abcf1Q6P542 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Abcf1Q6P542 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Abcf1Q6P542 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Abcf1Q6P542 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Gm18284-201ENSMUST00000172604 624 ntBASIC20.64■□□□□ 0.89
Abcf1Q6P542 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Abcf1Q6P542 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms