Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac4Q6NZM9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Gm7514-201ENSMUST00000209475 934 ntBASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac4Q6NZM9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 AV356131-201ENSMUST00000206201 750 ntBASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac4Q6NZM9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.73■□□□□ 0.91
Hdac4Q6NZM9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac4Q6NZM9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Gm10849-201ENSMUST00000100397 618 ntBASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.71■□□□□ 0.91
Hdac4Q6NZM9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac4Q6NZM9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Gm26571-201ENSMUST00000181399 666 ntBASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac4Q6NZM9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hdac4Q6NZM9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Hdac4Q6NZM9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms