Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc3Q64519 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc3Q64519 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sdc3Q64519 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc3Q64519 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc3Q64519 Gm7290-201ENSMUST00000104990 617 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Gm12918-201ENSMUST00000120234 636 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Gm15710-201ENSMUST00000121821 636 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc3Q64519 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.73■□□□□ 0.43
Sdc3Q64519 Gm5075-201ENSMUST00000196916 622 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sdc3Q64519 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Golph3-205ENSMUST00000228671 2842 ntBASIC17.73■□□□□ 0.43
Sdc3Q64519 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sdc3Q64519 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sdc3Q64519 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdc3Q64519 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdc3Q64519 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sdc3Q64519 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.72■□□□□ 0.43
Sdc3Q64519 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sdc3Q64519 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sdc3Q64519 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sdc3Q64519 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.71■□□□□ 0.43
Sdc3Q64519 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sdc3Q64519 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sdc3Q64519 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sdc3Q64519 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Sdc3Q64519 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sdc3Q64519 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc3Q64519 Gm12441-201ENSMUST00000121806 588 ntBASIC17.69■□□□□ 0.42
Sdc3Q64519 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.69■□□□□ 0.42
Sdc3Q64519 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Sdc3Q64519 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.69■□□□□ 0.42
Sdc3Q64519 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Gm4968-201ENSMUST00000071458 858 ntBASIC17.69■□□□□ 0.42
Sdc3Q64519 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sdc3Q64519 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.69■□□□□ 0.42
Sdc3Q64519 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sdc3Q64519 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sdc3Q64519 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sdc3Q64519 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.68■□□□□ 0.42
Sdc3Q64519 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sdc3Q64519 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sdc3Q64519 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.67■□□□□ 0.42
Sdc3Q64519 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms