Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.1□□□□□ -0.15
Zfp248Q640N4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Zfp248Q640N4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.09□□□□□ -0.15
Zfp248Q640N4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.09□□□□□ -0.15
Zfp248Q640N4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Zfp248Q640N4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Zfp248Q640N4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Zfp248Q640N4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.08□□□□□ -0.15
Zfp248Q640N4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.08□□□□□ -0.16
Zfp248Q640N4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.08□□□□□ -0.16
Zfp248Q640N4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.08□□□□□ -0.16
Zfp248Q640N4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.08□□□□□ -0.16
Zfp248Q640N4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Zfp248Q640N4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Zfp248Q640N4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Zfp248Q640N4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.06□□□□□ -0.16
Zfp248Q640N4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.05□□□□□ -0.16
Zfp248Q640N4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.05□□□□□ -0.16
Zfp248Q640N4 Gm38205-201ENSMUST00000192243 258 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms