Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd47Q61735 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd47Q61735 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd47Q61735 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cd47Q61735 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cd47Q61735 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd47Q61735 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd47Q61735 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd47Q61735 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.84■□□□□ 0.29
Cd47Q61735 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.84■□□□□ 0.29
Cd47Q61735 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Cd47Q61735 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Cd47Q61735 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd47Q61735 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.83■□□□□ 0.28
Cd47Q61735 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.83■□□□□ 0.28
Cd47Q61735 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd47Q61735 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cd47Q61735 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cd47Q61735 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.82■□□□□ 0.28
Cd47Q61735 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cd47Q61735 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.82■□□□□ 0.28
Cd47Q61735 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cd47Q61735 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Cd47Q61735 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd47Q61735 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cd47Q61735 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.81■□□□□ 0.28
Cd47Q61735 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.81■□□□□ 0.28
Cd47Q61735 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cd47Q61735 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.81■□□□□ 0.28
Cd47Q61735 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cd47Q61735 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cd47Q61735 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd47Q61735 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
Cd47Q61735 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.8■□□□□ 0.28
Cd47Q61735 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Cd47Q61735 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cd47Q61735 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd47Q61735 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.8■□□□□ 0.28
Cd47Q61735 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cd47Q61735 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.8■□□□□ 0.28
Cd47Q61735 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd47Q61735 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cd47Q61735 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Cd47Q61735 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd47Q61735 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms