Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ecm1Q61508 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ecm1Q61508 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ecm1Q61508 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.65■□□□□ 0.9
Ecm1Q61508 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ecm1Q61508 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Ecm1Q61508 Gm43183-201ENSMUST00000200632 547 ntBASIC20.65■□□□□ 0.9
Ecm1Q61508 Gm10138-203ENSMUST00000206952 366 ntBASIC20.65■□□□□ 0.9
Ecm1Q61508 Gm5417-201ENSMUST00000079706 384 ntBASIC20.65■□□□□ 0.9
Ecm1Q61508 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ecm1Q61508 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ecm1Q61508 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ecm1Q61508 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.64■□□□□ 0.9
Ecm1Q61508 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.64■□□□□ 0.89
Ecm1Q61508 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.64■□□□□ 0.89
Ecm1Q61508 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.64■□□□□ 0.89
Ecm1Q61508 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.64■□□□□ 0.89
Ecm1Q61508 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ecm1Q61508 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ecm1Q61508 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.63■□□□□ 0.89
Ecm1Q61508 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ecm1Q61508 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Ecm1Q61508 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ecm1Q61508 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ecm1Q61508 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ecm1Q61508 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ecm1Q61508 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ecm1Q61508 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ecm1Q61508 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ecm1Q61508 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ecm1Q61508 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Ecm1Q61508 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Ecm1Q61508 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.61■□□□□ 0.89
Ecm1Q61508 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Gm18025-201ENSMUST00000221733 862 ntBASIC20.61■□□□□ 0.89
Ecm1Q61508 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Golph3-202ENSMUST00000226517 2359 ntBASIC20.61■□□□□ 0.89
Ecm1Q61508 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ecm1Q61508 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ecm1Q61508 Gm6433-201ENSMUST00000118634 875 ntBASIC20.6■□□□□ 0.89
Ecm1Q61508 Gm15375-201ENSMUST00000119510 849 ntBASIC20.6■□□□□ 0.89
Ecm1Q61508 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Gm43799-201ENSMUST00000201845 579 ntBASIC20.6■□□□□ 0.89
Ecm1Q61508 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ecm1Q61508 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ecm1Q61508 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ecm1Q61508 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ecm1Q61508 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm38285-201ENSMUST00000192928 922 ntBASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm21814-202ENSMUST00000203277 873 ntBASIC20.59■□□□□ 0.89
Ecm1Q61508 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms