Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.51■□□□□ 0.55
Col12a1Q60847 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.51■□□□□ 0.55
Col12a1Q60847 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.51■□□□□ 0.55
Col12a1Q60847 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.51■□□□□ 0.55
Col12a1Q60847 Gm45058-201ENSMUST00000205810 766 ntBASIC18.51■□□□□ 0.55
Col12a1Q60847 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.5■□□□□ 0.55
Col12a1Q60847 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col12a1Q60847 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col12a1Q60847 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.5■□□□□ 0.55
Col12a1Q60847 Flg-201ENSMUST00000050758 1488 ntBASIC18.5■□□□□ 0.55
Col12a1Q60847 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col12a1Q60847 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col12a1Q60847 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col12a1Q60847 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col12a1Q60847 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col12a1Q60847 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Col12a1Q60847 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col12a1Q60847 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col12a1Q60847 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.48■□□□□ 0.55
Col12a1Q60847 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.48■□□□□ 0.55
Col12a1Q60847 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col12a1Q60847 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.47■□□□□ 0.55
Col12a1Q60847 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.47■□□□□ 0.55
Col12a1Q60847 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col12a1Q60847 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col12a1Q60847 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Col12a1Q60847 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Col12a1Q60847 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col12a1Q60847 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Col12a1Q60847 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Gm37292-201ENSMUST00000192062 758 ntBASIC18.46■□□□□ 0.55
Col12a1Q60847 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col12a1Q60847 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col12a1Q60847 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Col12a1Q60847 Gm15375-201ENSMUST00000119510 849 ntBASIC18.45■□□□□ 0.54
Col12a1Q60847 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.45■□□□□ 0.54
Col12a1Q60847 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col12a1Q60847 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col12a1Q60847 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col12a1Q60847 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Col12a1Q60847 Gm22697-201ENSMUST00000175194 63 ntBASIC18.45■□□□□ 0.54
Col12a1Q60847 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Col12a1Q60847 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col12a1Q60847 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col12a1Q60847 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col12a1Q60847 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.45■□□□□ 0.54
Col12a1Q60847 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Gm7153-201ENSMUST00000117092 455 ntBASIC18.44■□□□□ 0.54
Col12a1Q60847 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col12a1Q60847 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col12a1Q60847 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col12a1Q60847 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.43■□□□□ 0.54
Col12a1Q60847 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.43■□□□□ 0.54
Col12a1Q60847 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col12a1Q60847 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms