Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav7-2Q5R1I3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav7-2Q5R1I3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7-2Q5R1I3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7-2Q5R1I3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7-2Q5R1I3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-2Q5R1I3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-2Q5R1I3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-2Q5R1I3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-2Q5R1I3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms