Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC32.76■■■□□ 2.83
Pds5bQ4VA53 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC32.76■■■□□ 2.83
Pds5bQ4VA53 Gm5867-201ENSMUST00000063197 592 ntBASIC32.76■■■□□ 2.83
Pds5bQ4VA53 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pds5bQ4VA53 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
Pds5bQ4VA53 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Pds5bQ4VA53 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
Pds5bQ4VA53 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Pds5bQ4VA53 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Pds5bQ4VA53 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Pds5bQ4VA53 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Pds5bQ4VA53 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pds5bQ4VA53 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC32.72■■■□□ 2.83
Pds5bQ4VA53 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
Pds5bQ4VA53 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC32.72■■■□□ 2.83
Pds5bQ4VA53 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pds5bQ4VA53 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Pds5bQ4VA53 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pds5bQ4VA53 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Pds5bQ4VA53 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Pds5bQ4VA53 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
Pds5bQ4VA53 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Pds5bQ4VA53 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Pds5bQ4VA53 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Pds5bQ4VA53 Gm38027-201ENSMUST00000192315 235 ntBASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Gm26766-202ENSMUST00000227544 2347 ntBASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Gm5587-201ENSMUST00000206270 674 ntBASIC32.68■■■□□ 2.82
Pds5bQ4VA53 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pds5bQ4VA53 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
Pds5bQ4VA53 Gm5540-201ENSMUST00000131852 1848 ntBASIC32.67■■■□□ 2.82
Pds5bQ4VA53 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC32.67■■■□□ 2.82
Pds5bQ4VA53 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Pds5bQ4VA53 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC32.67■■■□□ 2.82
Pds5bQ4VA53 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC32.67■■■□□ 2.82
Pds5bQ4VA53 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Pds5bQ4VA53 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Pds5bQ4VA53 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Pds5bQ4VA53 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
Pds5bQ4VA53 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC32.65■■■□□ 2.82
Pds5bQ4VA53 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC32.65■■■□□ 2.82
Pds5bQ4VA53 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Gm12085-201ENSMUST00000119263 940 ntBASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Gm10654-201ENSMUST00000098653 1633 ntBASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Pds5bQ4VA53 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Gm43514-201ENSMUST00000198852 424 ntBASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Pds5bQ4VA53 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pds5bQ4VA53 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pds5bQ4VA53 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pds5bQ4VA53 Gm16061-201ENSMUST00000122167 857 ntBASIC32.62■■■□□ 2.81
Pds5bQ4VA53 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pds5bQ4VA53 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
Pds5bQ4VA53 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Pds5bQ4VA53 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms