Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc6aQ3UHK8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc6aQ3UHK8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc6aQ3UHK8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc6aQ3UHK8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc6aQ3UHK8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.24■□□□□ 0.35
Tnrc6aQ3UHK8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc6aQ3UHK8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc6aQ3UHK8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnrc6aQ3UHK8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnrc6aQ3UHK8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Gm11643-201ENSMUST00000119578 864 ntBASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnrc6aQ3UHK8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tnrc6aQ3UHK8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnrc6aQ3UHK8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms