Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Snx27Q3UHD6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Gm10812-201ENSMUST00000099864 546 ntBASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snx27Q3UHD6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Snx27Q3UHD6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Gm22325-201ENSMUST00000158904 308 ntBASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snx27Q3UHD6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Snx27Q3UHD6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snx27Q3UHD6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.02■□□□□ 0.8
Snx27Q3UHD6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Snx27Q3UHD6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Snx27Q3UHD6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.01■□□□□ 0.79
Snx27Q3UHD6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snx27Q3UHD6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.01■□□□□ 0.79
Snx27Q3UHD6 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.01■□□□□ 0.79
Snx27Q3UHD6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snx27Q3UHD6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snx27Q3UHD6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snx27Q3UHD6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20■□□□□ 0.79
Snx27Q3UHD6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Flg-201ENSMUST00000050758 1488 ntBASIC20■□□□□ 0.79
Snx27Q3UHD6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Gm18666-201ENSMUST00000190039 958 ntBASIC20■□□□□ 0.79
Snx27Q3UHD6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20■□□□□ 0.79
Snx27Q3UHD6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20■□□□□ 0.79
Snx27Q3UHD6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20■□□□□ 0.79
Snx27Q3UHD6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Snx27Q3UHD6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms