Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cul4aQ3TCH7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.49■□□□□ 0.71
Cul4aQ3TCH7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cul4aQ3TCH7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cul4aQ3TCH7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cul4aQ3TCH7 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cul4aQ3TCH7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.44■□□□□ 0.7
Cul4aQ3TCH7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms