Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nhej1Q3KNJ2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.75■□□□□ 0.75
Nhej1Q3KNJ2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nhej1Q3KNJ2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nhej1Q3KNJ2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nhej1Q3KNJ2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nhej1Q3KNJ2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Nhej1Q3KNJ2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Nhej1Q3KNJ2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nhej1Q3KNJ2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nhej1Q3KNJ2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms