Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.87■□□□□ 0.45
Ptchd3Q0EEE2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ptchd3Q0EEE2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Gm8493-201ENSMUST00000196881 489 ntBASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Serp2-204ENSMUST00000228055 705 ntBASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ptchd3Q0EEE2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ptchd3Q0EEE2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ptchd3Q0EEE2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ptchd3Q0EEE2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
Ptchd3Q0EEE2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ptchd3Q0EEE2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ptchd3Q0EEE2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Ptchd3Q0EEE2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms