Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43bP86448 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43bP86448 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43bP86448 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.02■□□□□ 0.64
Trim43bP86448 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim43bP86448 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim43bP86448 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim43bP86448 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.01■□□□□ 0.63
Trim43bP86448 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trim43bP86448 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim43bP86448 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim43bP86448 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim43bP86448 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.01■□□□□ 0.63
Trim43bP86448 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim43bP86448 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trim43bP86448 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim43bP86448 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.01■□□□□ 0.63
Trim43bP86448 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trim43bP86448 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim43bP86448 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19■□□□□ 0.63
Trim43bP86448 AC099934.2-201ENSMUST00000196389 70 ntBASIC19■□□□□ 0.63
Trim43bP86448 AC156953.1-201ENSMUST00000196953 70 ntBASIC19■□□□□ 0.63
Trim43bP86448 AC157822.2-201ENSMUST00000200291 70 ntBASIC19■□□□□ 0.63
Trim43bP86448 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19■□□□□ 0.63
Trim43bP86448 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim43bP86448 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim43bP86448 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43bP86448 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43bP86448 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43bP86448 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim43bP86448 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim43bP86448 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim43bP86448 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43bP86448 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43bP86448 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim43bP86448 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim43bP86448 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim43bP86448 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim43bP86448 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
Trim43bP86448 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43bP86448 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.97■□□□□ 0.63
Trim43bP86448 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim43bP86448 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.97■□□□□ 0.63
Trim43bP86448 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim43bP86448 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Trim43bP86448 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim43bP86448 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim43bP86448 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim43bP86448 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43bP86448 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim43bP86448 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Gm42642-201ENSMUST00000200683 355 ntBASIC18.96■□□□□ 0.63
Trim43bP86448 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.96■□□□□ 0.63
Trim43bP86448 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43bP86448 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim43bP86448 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim43bP86448 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim43bP86448 Gm27801-201ENSMUST00000184174 223 ntBASIC18.95■□□□□ 0.62
Trim43bP86448 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Trim43bP86448 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms