Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Gm8520-201ENSMUST00000186517 868 ntBASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Slc9a3r1P70441 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Slc9a3r1P70441 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Trmt13-210ENSMUST00000198454 880 ntBASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Slc9a3r1P70441 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Gm13168-201ENSMUST00000121771 632 ntBASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slc9a3r1P70441 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc9a3r1P70441 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Gm12896-201ENSMUST00000118430 226 ntBASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.67■□□□□ 0.42
Slc9a3r1P70441 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Gm27275-201ENSMUST00000184318 272 ntBASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc9a3r1P70441 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc9a3r1P70441 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Slc9a3r1P70441 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Slc9a3r1P70441 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc9a3r1P70441 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms