Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.23■□□□□ 0.67
Surf6P70279 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Surf6P70279 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Surf6P70279 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.23■□□□□ 0.67
Surf6P70279 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Surf6P70279 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Surf6P70279 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Surf6P70279 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.22■□□□□ 0.67
Surf6P70279 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Gm22238-201ENSMUST00000175222 88 ntBASIC19.22■□□□□ 0.67
Surf6P70279 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Surf6P70279 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Surf6P70279 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Surf6P70279 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Surf6P70279 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Surf6P70279 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Surf6P70279 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.2■□□□□ 0.66
Surf6P70279 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Surf6P70279 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Surf6P70279 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Surf6P70279 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.2■□□□□ 0.66
Surf6P70279 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Surf6P70279 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.2■□□□□ 0.66
Surf6P70279 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Surf6P70279 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Surf6P70279 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Surf6P70279 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Surf6P70279 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Surf6P70279 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Surf6P70279 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.19■□□□□ 0.66
Surf6P70279 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.19■□□□□ 0.66
Surf6P70279 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.19■□□□□ 0.66
Surf6P70279 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Surf6P70279 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
Surf6P70279 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.18■□□□□ 0.66
Surf6P70279 Gm13241-201ENSMUST00000094493 780 ntBASIC19.18■□□□□ 0.66
Surf6P70279 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.18■□□□□ 0.66
Surf6P70279 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Surf6P70279 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Surf6P70279 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Surf6P70279 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.17■□□□□ 0.66
Surf6P70279 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Surf6P70279 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Surf6P70279 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Surf6P70279 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Surf6P70279 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.16■□□□□ 0.66
Surf6P70279 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Surf6P70279 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Surf6P70279 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Surf6P70279 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms