Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pfn1P62962 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.38□□□□□ -0.11
Pfn1P62962 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pfn1P62962 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pfn1P62962 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Pfn1P62962 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pfn1P62962 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pfn1P62962 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.37□□□□□ -0.11
Pfn1P62962 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.37□□□□□ -0.11
Pfn1P62962 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Pfn1P62962 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.37□□□□□ -0.11
Pfn1P62962 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pfn1P62962 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pfn1P62962 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.36□□□□□ -0.11
Pfn1P62962 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.36□□□□□ -0.11
Pfn1P62962 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.36□□□□□ -0.11
Pfn1P62962 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Pfn1P62962 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pfn1P62962 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfn1P62962 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Pfn1P62962 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pfn1P62962 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pfn1P62962 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pfn1P62962 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.35□□□□□ -0.11
Pfn1P62962 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfn1P62962 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pfn1P62962 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.35□□□□□ -0.11
Pfn1P62962 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pfn1P62962 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfn1P62962 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms