Protein–RNA interactions for Protein: P61080

Ube2d1, Ubiquitin-conjugating enzyme E2 D1, mousemouse

Known RBP Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d1P61080 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube2d1P61080 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ube2d1P61080 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ube2d1P61080 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Ube2d1P61080 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ube2d1P61080 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.01□□□□□ -0.33
Ube2d1P61080 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ube2d1P61080 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ube2d1P61080 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Gm42501-201ENSMUST00000200220 1026 ntBASIC13□□□□□ -0.33
Ube2d1P61080 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ube2d1P61080 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ube2d1P61080 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.99□□□□□ -0.33
Ube2d1P61080 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ube2d1P61080 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ube2d1P61080 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ube2d1P61080 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ube2d1P61080 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ube2d1P61080 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ube2d1P61080 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ube2d1P61080 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ube2d1P61080 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.97□□□□□ -0.33
Ube2d1P61080 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ube2d1P61080 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.97□□□□□ -0.33
Ube2d1P61080 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.97□□□□□ -0.33
Ube2d1P61080 Gm15820-201ENSMUST00000201566 728 ntBASIC12.97□□□□□ -0.33
Ube2d1P61080 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ube2d1P61080 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms