Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ube2d3P61079 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ube2d3P61079 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ube2d3P61079 Gm12821-201ENSMUST00000120022 600 ntBASIC13.24□□□□□ -0.29
Ube2d3P61079 Gm43173-201ENSMUST00000202246 593 ntBASIC13.24□□□□□ -0.29
Ube2d3P61079 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ube2d3P61079 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ube2d3P61079 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ube2d3P61079 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ube2d3P61079 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ube2d3P61079 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ube2d3P61079 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.23□□□□□ -0.29
Ube2d3P61079 Gm27801-201ENSMUST00000184174 223 ntBASIC13.23□□□□□ -0.29
Ube2d3P61079 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ube2d3P61079 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.23□□□□□ -0.29
Ube2d3P61079 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ube2d3P61079 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ube2d3P61079 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Gm7860-201ENSMUST00000121190 879 ntBASIC13.22□□□□□ -0.29
Ube2d3P61079 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ube2d3P61079 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.22□□□□□ -0.29
Ube2d3P61079 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.22□□□□□ -0.29
Ube2d3P61079 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ube2d3P61079 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ube2d3P61079 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.21□□□□□ -0.29
Ube2d3P61079 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ube2d3P61079 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.21□□□□□ -0.29
Ube2d3P61079 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ube2d3P61079 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ube2d3P61079 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube2d3P61079 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube2d3P61079 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ube2d3P61079 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube2d3P61079 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ube2d3P61079 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ube2d3P61079 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.2□□□□□ -0.3
Ube2d3P61079 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ube2d3P61079 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms