Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.67■■□□□ 1.38
Msh6P54276 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Msh6P54276 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Msh6P54276 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Msh6P54276 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.66■■□□□ 1.38
Msh6P54276 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC23.66■■□□□ 1.38
Msh6P54276 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Msh6P54276 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Msh6P54276 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC23.65■■□□□ 1.38
Msh6P54276 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.65■■□□□ 1.38
Msh6P54276 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.65■■□□□ 1.38
Msh6P54276 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.65■■□□□ 1.38
Msh6P54276 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.65■■□□□ 1.38
Msh6P54276 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Mir5122-201ENSMUST00000175004 89 ntBASIC23.65■■□□□ 1.38
Msh6P54276 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.65■■□□□ 1.38
Msh6P54276 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Msh6P54276 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Msh6P54276 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Msh6P54276 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Msh6P54276 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Msh6P54276 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Msh6P54276 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Msh6P54276 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.63■■□□□ 1.37
Msh6P54276 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Msh6P54276 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC23.63■■□□□ 1.37
Msh6P54276 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Msh6P54276 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Msh6P54276 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.63■■□□□ 1.37
Msh6P54276 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Msh6P54276 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC23.62■■□□□ 1.37
Msh6P54276 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Msh6P54276 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.62■■□□□ 1.37
Msh6P54276 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Msh6P54276 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC23.61■■□□□ 1.37
Msh6P54276 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Msh6P54276 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Msh6P54276 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Msh6P54276 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Msh6P54276 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.61■■□□□ 1.37
Msh6P54276 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Msh6P54276 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Msh6P54276 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Msh6P54276 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Msh6P54276 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Msh6P54276 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Msh6P54276 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Msh6P54276 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Msh6P54276 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.6■■□□□ 1.37
Msh6P54276 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Msh6P54276 Gm9987-201ENSMUST00000069768 567 ntBASIC23.6■■□□□ 1.37
Msh6P54276 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Msh6P54276 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Msh6P54276 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Msh6P54276 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Msh6P54276 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.59■■□□□ 1.37
Msh6P54276 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Msh6P54276 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.59■■□□□ 1.37
Msh6P54276 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Msh6P54276 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Msh6P54276 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Msh6P54276 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Msh6P54276 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Msh6P54276 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Msh6P54276 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.58■■□□□ 1.37
Msh6P54276 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Msh6P54276 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Msh6P54276 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Msh6P54276 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Msh6P54276 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms