Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.07■□□□□ 0.96
Brca1P48754 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.07■□□□□ 0.96
Brca1P48754 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.07■□□□□ 0.96
Brca1P48754 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Brca1P48754 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Brca1P48754 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Brca1P48754 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.06■□□□□ 0.96
Brca1P48754 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Brca1P48754 Timm23-208ENSMUST00000226683 750 ntBASIC21.06■□□□□ 0.96
Brca1P48754 Odf3b-204ENSMUST00000227834 930 ntBASIC21.06■□□□□ 0.96
Brca1P48754 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Brca1P48754 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.06■□□□□ 0.96
Brca1P48754 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Brca1P48754 Gm33142-201ENSMUST00000193913 867 ntBASIC21.06■□□□□ 0.96
Brca1P48754 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Brca1P48754 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Brca1P48754 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Brca1P48754 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brca1P48754 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brca1P48754 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brca1P48754 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Brca1P48754 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Brca1P48754 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.05■□□□□ 0.96
Brca1P48754 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Brca1P48754 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.05■□□□□ 0.96
Brca1P48754 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Brca1P48754 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brca1P48754 Gm15375-201ENSMUST00000119510 849 ntBASIC21.04■□□□□ 0.96
Brca1P48754 Gm23634-201ENSMUST00000175071 91 ntBASIC21.04■□□□□ 0.96
Brca1P48754 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Brca1P48754 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brca1P48754 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brca1P48754 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Brca1P48754 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Brca1P48754 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Brca1P48754 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.03■□□□□ 0.96
Brca1P48754 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Brca1P48754 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Brca1P48754 Gm6345-202ENSMUST00000180900 204 ntBASIC21.02■□□□□ 0.96
Brca1P48754 Gm18032-201ENSMUST00000222541 538 ntBASIC21.02■□□□□ 0.96
Brca1P48754 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Brca1P48754 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Brca1P48754 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Brca1P48754 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.01■□□□□ 0.95
Brca1P48754 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.01■□□□□ 0.95
Brca1P48754 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Brca1P48754 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.01■□□□□ 0.95
Brca1P48754 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Gm12382-201ENSMUST00000122005 922 ntBASIC21.01■□□□□ 0.95
Brca1P48754 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.01■□□□□ 0.95
Brca1P48754 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.01■□□□□ 0.95
Brca1P48754 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Brca1P48754 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21■□□□□ 0.95
Brca1P48754 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21■□□□□ 0.95
Brca1P48754 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Brca1P48754 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brca1P48754 Gm37292-201ENSMUST00000192062 758 ntBASIC20.99■□□□□ 0.95
Brca1P48754 Gm43183-201ENSMUST00000200632 547 ntBASIC20.99■□□□□ 0.95
Brca1P48754 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Brca1P48754 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brca1P48754 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Brca1P48754 Gm10138-203ENSMUST00000206952 366 ntBASIC20.99■□□□□ 0.95
Brca1P48754 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Brca1P48754 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Brca1P48754 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms