Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.33■□□□□ 0.53
Cd9P40240 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cd9P40240 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Cd9P40240 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.33■□□□□ 0.53
Cd9P40240 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd9P40240 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cd9P40240 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.33■□□□□ 0.52
Cd9P40240 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd9P40240 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cd9P40240 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cd9P40240 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd9P40240 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.33■□□□□ 0.52
Cd9P40240 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd9P40240 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd9P40240 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd9P40240 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.32■□□□□ 0.52
Cd9P40240 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Nespas-201ENSMUST00000143738 1083 ntBASIC18.32■□□□□ 0.52
Cd9P40240 Gm22325-201ENSMUST00000158904 308 ntBASIC18.32■□□□□ 0.52
Cd9P40240 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.32■□□□□ 0.52
Cd9P40240 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd9P40240 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd9P40240 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd9P40240 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cd9P40240 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.31■□□□□ 0.52
Cd9P40240 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.31■□□□□ 0.52
Cd9P40240 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd9P40240 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd9P40240 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.31■□□□□ 0.52
Cd9P40240 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd9P40240 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Cd9P40240 Gm8495-201ENSMUST00000188740 694 ntBASIC18.3■□□□□ 0.52
Cd9P40240 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cd9P40240 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd9P40240 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.29■□□□□ 0.52
Cd9P40240 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.29■□□□□ 0.52
Cd9P40240 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.29■□□□□ 0.52
Cd9P40240 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.29■□□□□ 0.52
Cd9P40240 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.29■□□□□ 0.52
Cd9P40240 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.29■□□□□ 0.52
Cd9P40240 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd9P40240 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cd9P40240 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.28■□□□□ 0.52
Cd9P40240 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.28■□□□□ 0.52
Cd9P40240 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.28■□□□□ 0.52
Cd9P40240 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.28■□□□□ 0.52
Cd9P40240 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd9P40240 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Cd9P40240 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.27■□□□□ 0.52
Cd9P40240 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cd9P40240 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.27■□□□□ 0.52
Cd9P40240 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.27■□□□□ 0.52
Cd9P40240 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd9P40240 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd9P40240 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd9P40240 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd9P40240 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.27■□□□□ 0.52
Cd9P40240 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd9P40240 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd9P40240 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd9P40240 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd9P40240 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd9P40240 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cd9P40240 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cd9P40240 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd9P40240 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cd9P40240 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms