Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn1aP39689 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn1aP39689 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn1aP39689 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.3■□□□□ 0.04
Cdkn1aP39689 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn1aP39689 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cdkn1aP39689 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.29■□□□□ 0.04
Cdkn1aP39689 Gm37856-201ENSMUST00000191634 999 ntBASIC15.29■□□□□ 0.04
Cdkn1aP39689 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.29■□□□□ 0.04
Cdkn1aP39689 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.29■□□□□ 0.04
Cdkn1aP39689 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cdkn1aP39689 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.28■□□□□ 0.04
Cdkn1aP39689 Trmt13-210ENSMUST00000198454 880 ntBASIC15.28■□□□□ 0.04
Cdkn1aP39689 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.28■□□□□ 0.04
Cdkn1aP39689 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cdkn1aP39689 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn1aP39689 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.27■□□□□ 0.04
Cdkn1aP39689 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cdkn1aP39689 Gm12896-201ENSMUST00000118430 226 ntBASIC15.27■□□□□ 0.04
Cdkn1aP39689 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cdkn1aP39689 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdkn1aP39689 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdkn1aP39689 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Gm27275-201ENSMUST00000184318 272 ntBASIC15.25■□□□□ 0.03
Cdkn1aP39689 Gm2559-201ENSMUST00000201323 363 ntBASIC15.25■□□□□ 0.03
Cdkn1aP39689 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdkn1aP39689 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Gm8520-201ENSMUST00000186517 868 ntBASIC15.24■□□□□ 0.03
Cdkn1aP39689 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.24■□□□□ 0.03
Cdkn1aP39689 Gm44549-201ENSMUST00000208351 577 ntBASIC15.24■□□□□ 0.03
Cdkn1aP39689 Notumos-201ENSMUST00000151998 2659 ntBASIC15.24■□□□□ 0.03
Cdkn1aP39689 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdkn1aP39689 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdkn1aP39689 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms