Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm10602-201ENSMUST00000098239 609 ntBASIC17.56■□□□□ 0.4
Slc6a11P31650 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a11P31650 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a11P31650 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Slc6a11P31650 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc6a11P31650 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a11P31650 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Gm10033-202ENSMUST00000211874 928 ntBASIC17.55■□□□□ 0.4
Slc6a11P31650 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.55■□□□□ 0.4
Slc6a11P31650 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.55■□□□□ 0.4
Slc6a11P31650 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a11P31650 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a11P31650 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc6a11P31650 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc6a11P31650 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Slc6a11P31650 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a11P31650 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc6a11P31650 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a11P31650 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.53■□□□□ 0.4
Slc6a11P31650 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.53■□□□□ 0.4
Slc6a11P31650 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.53■□□□□ 0.4
Slc6a11P31650 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc6a11P31650 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
Slc6a11P31650 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.53■□□□□ 0.4
Slc6a11P31650 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a11P31650 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc6a11P31650 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a11P31650 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a11P31650 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc6a11P31650 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc6a11P31650 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a11P31650 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a11P31650 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.52■□□□□ 0.4
Slc6a11P31650 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Slc6a11P31650 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a11P31650 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a11P31650 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a11P31650 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a11P31650 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc6a11P31650 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a11P31650 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc6a11P31650 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc6a11P31650 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Slc6a11P31650 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc6a11P31650 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a11P31650 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms