Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.45■■□□□ 1.02
Vcam1P29533 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.45■■□□□ 1.02
Vcam1P29533 Mtag2-201ENSMUST00000058665 714 ntBASIC21.45■■□□□ 1.02
Vcam1P29533 Zfp783-201ENSMUST00000095946 670 ntBASIC21.45■■□□□ 1.02
Vcam1P29533 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.45■■□□□ 1.02
Vcam1P29533 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcam1P29533 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vcam1P29533 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vcam1P29533 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Vcam1P29533 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Vcam1P29533 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.44■■□□□ 1.02
Vcam1P29533 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Vcam1P29533 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Vcam1P29533 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vcam1P29533 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Vcam1P29533 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcam1P29533 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.43■■□□□ 1.02
Vcam1P29533 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcam1P29533 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcam1P29533 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vcam1P29533 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vcam1P29533 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Vcam1P29533 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Vcam1P29533 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Vcam1P29533 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vcam1P29533 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.42■■□□□ 1.02
Vcam1P29533 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.42■■□□□ 1.02
Vcam1P29533 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.42■■□□□ 1.02
Vcam1P29533 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.42■■□□□ 1.02
Vcam1P29533 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vcam1P29533 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vcam1P29533 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.42■■□□□ 1.02
Vcam1P29533 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Vcam1P29533 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Vcam1P29533 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.41■■□□□ 1.02
Vcam1P29533 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.41■■□□□ 1.02
Vcam1P29533 Mir1199-201ENSMUST00000117015 119 ntBASIC21.41■■□□□ 1.02
Vcam1P29533 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Vcam1P29533 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Vcam1P29533 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vcam1P29533 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Vcam1P29533 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Vcam1P29533 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vcam1P29533 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vcam1P29533 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vcam1P29533 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.4■■□□□ 1.02
Vcam1P29533 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.4■■□□□ 1.02
Vcam1P29533 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vcam1P29533 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vcam1P29533 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vcam1P29533 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.39■■□□□ 1.02
Vcam1P29533 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Vcam1P29533 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Vcam1P29533 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vcam1P29533 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.38■■□□□ 1.01
Vcam1P29533 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.38■■□□□ 1.01
Vcam1P29533 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vcam1P29533 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.37■■□□□ 1.01
Vcam1P29533 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vcam1P29533 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Vcam1P29533 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vcam1P29533 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vcam1P29533 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.37■■□□□ 1.01
Vcam1P29533 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vcam1P29533 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vcam1P29533 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.36■■□□□ 1.01
Vcam1P29533 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vcam1P29533 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vcam1P29533 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vcam1P29533 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vcam1P29533 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vcam1P29533 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms