Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nfkb1P25799 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.03■□□□□ 0.64
Nfkb1P25799 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nfkb1P25799 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.02■□□□□ 0.64
Nfkb1P25799 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nfkb1P25799 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Nfkb1P25799 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nfkb1P25799 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nfkb1P25799 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nfkb1P25799 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nfkb1P25799 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nfkb1P25799 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nfkb1P25799 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nfkb1P25799 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.01■□□□□ 0.63
Nfkb1P25799 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.01■□□□□ 0.63
Nfkb1P25799 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Nfkb1P25799 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nfkb1P25799 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Nfkb1P25799 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nfkb1P25799 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nfkb1P25799 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19■□□□□ 0.63
Nfkb1P25799 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19■□□□□ 0.63
Nfkb1P25799 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nfkb1P25799 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nfkb1P25799 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nfkb1P25799 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nfkb1P25799 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.99■□□□□ 0.63
Nfkb1P25799 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.99■□□□□ 0.63
Nfkb1P25799 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nfkb1P25799 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Nfkb1P25799 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.98■□□□□ 0.63
Nfkb1P25799 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 Dio3-201ENSMUST00000097228 1449 ntBASIC18.98■□□□□ 0.63
Nfkb1P25799 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nfkb1P25799 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nfkb1P25799 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Nfkb1P25799 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nfkb1P25799 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.97■□□□□ 0.63
Nfkb1P25799 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nfkb1P25799 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nfkb1P25799 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Nfkb1P25799 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.96■□□□□ 0.63
Nfkb1P25799 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Nfkb1P25799 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nfkb1P25799 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nfkb1P25799 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nfkb1P25799 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.96■□□□□ 0.63
Nfkb1P25799 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nfkb1P25799 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nfkb1P25799 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nfkb1P25799 Gm10812-201ENSMUST00000099864 546 ntBASIC18.96■□□□□ 0.63
Nfkb1P25799 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.96■□□□□ 0.63
Nfkb1P25799 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nfkb1P25799 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Nfkb1P25799 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nfkb1P25799 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nfkb1P25799 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nfkb1P25799 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.95■□□□□ 0.62
Nfkb1P25799 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nfkb1P25799 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nfkb1P25799 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nfkb1P25799 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nfkb1P25799 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nfkb1P25799 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nfkb1P25799 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nfkb1P25799 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nfkb1P25799 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms