Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxd8P23463 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxd8P23463 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hoxd8P23463 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.24■□□□□ 0.67
Hoxd8P23463 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.24■□□□□ 0.67
Hoxd8P23463 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hoxd8P23463 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxd8P23463 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxd8P23463 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.23■□□□□ 0.67
Hoxd8P23463 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxd8P23463 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxd8P23463 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxd8P23463 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hoxd8P23463 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.22■□□□□ 0.67
Hoxd8P23463 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.22■□□□□ 0.67
Hoxd8P23463 Gm37055-201ENSMUST00000191866 133 ntBASIC19.22■□□□□ 0.67
Hoxd8P23463 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hoxd8P23463 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hoxd8P23463 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hoxd8P23463 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Hoxd8P23463 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.21■□□□□ 0.67
Hoxd8P23463 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hoxd8P23463 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Hoxd8P23463 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Hoxd8P23463 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Gm15375-201ENSMUST00000119510 849 ntBASIC19.2■□□□□ 0.66
Hoxd8P23463 Mir5122-201ENSMUST00000175004 89 ntBASIC19.2■□□□□ 0.66
Hoxd8P23463 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hoxd8P23463 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxd8P23463 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hoxd8P23463 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxd8P23463 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxd8P23463 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxd8P23463 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxd8P23463 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxd8P23463 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.19■□□□□ 0.66
Hoxd8P23463 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hoxd8P23463 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hoxd8P23463 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.18■□□□□ 0.66
Hoxd8P23463 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.18■□□□□ 0.66
Hoxd8P23463 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxd8P23463 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hoxd8P23463 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
Hoxd8P23463 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.17■□□□□ 0.66
Hoxd8P23463 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Hoxd8P23463 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hoxd8P23463 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.17■□□□□ 0.66
Hoxd8P23463 Gm18025-201ENSMUST00000221733 862 ntBASIC19.17■□□□□ 0.66
Hoxd8P23463 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxd8P23463 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms