Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmga1P17095 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmga1P17095 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmga1P17095 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmga1P17095 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hmga1P17095 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmga1P17095 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmga1P17095 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hmga1P17095 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hmga1P17095 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmga1P17095 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19■□□□□ 0.63
Hmga1P17095 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hmga1P17095 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19■□□□□ 0.63
Hmga1P17095 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19■□□□□ 0.63
Hmga1P17095 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19■□□□□ 0.63
Hmga1P17095 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmga1P17095 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hmga1P17095 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Gm11927-201ENSMUST00000118472 759 ntBASIC18.99■□□□□ 0.63
Hmga1P17095 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.99■□□□□ 0.63
Hmga1P17095 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmga1P17095 Flg-201ENSMUST00000050758 1488 ntBASIC18.98■□□□□ 0.63
Hmga1P17095 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hmga1P17095 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.98■□□□□ 0.63
Hmga1P17095 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.98■□□□□ 0.63
Hmga1P17095 Notumos-201ENSMUST00000151998 2659 ntBASIC18.98■□□□□ 0.63
Hmga1P17095 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmga1P17095 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.98■□□□□ 0.63
Hmga1P17095 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hmga1P17095 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.97■□□□□ 0.63
Hmga1P17095 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.97■□□□□ 0.63
Hmga1P17095 Gm10698-201ENSMUST00000182663 604 ntBASIC18.97■□□□□ 0.63
Hmga1P17095 Gm18666-201ENSMUST00000190039 958 ntBASIC18.97■□□□□ 0.63
Hmga1P17095 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.97■□□□□ 0.63
Hmga1P17095 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmga1P17095 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Hmga1P17095 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.96■□□□□ 0.63
Hmga1P17095 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.96■□□□□ 0.63
Hmga1P17095 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.96■□□□□ 0.63
Hmga1P17095 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Hmga1P17095 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.96■□□□□ 0.63
Hmga1P17095 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hmga1P17095 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hmga1P17095 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmga1P17095 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms