Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn1P12960 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn1P12960 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cntn1P12960 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.77■□□□□ 0.44
Cntn1P12960 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.77■□□□□ 0.44
Cntn1P12960 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.77■□□□□ 0.44
Cntn1P12960 Rab3c-203ENSMUST00000224180 967 ntBASIC17.77■□□□□ 0.44
Cntn1P12960 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Cntn1P12960 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cntn1P12960 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cntn1P12960 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cntn1P12960 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.76■□□□□ 0.43
Cntn1P12960 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cntn1P12960 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cntn1P12960 Golph3-205ENSMUST00000228671 2842 ntBASIC17.75■□□□□ 0.43
Cntn1P12960 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.75■□□□□ 0.43
Cntn1P12960 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.75■□□□□ 0.43
Cntn1P12960 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.75■□□□□ 0.43
Cntn1P12960 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.75■□□□□ 0.43
Cntn1P12960 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cntn1P12960 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.74■□□□□ 0.43
Cntn1P12960 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.74■□□□□ 0.43
Cntn1P12960 Gm20049-201ENSMUST00000219950 730 ntBASIC17.74■□□□□ 0.43
Cntn1P12960 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cntn1P12960 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.74■□□□□ 0.43
Cntn1P12960 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.74■□□□□ 0.43
Cntn1P12960 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cntn1P12960 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.73■□□□□ 0.43
Cntn1P12960 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cntn1P12960 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cntn1P12960 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cntn1P12960 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cntn1P12960 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.73■□□□□ 0.43
Cntn1P12960 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cntn1P12960 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.72■□□□□ 0.43
Cntn1P12960 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Cntn1P12960 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cntn1P12960 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.72■□□□□ 0.43
Cntn1P12960 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.72■□□□□ 0.43
Cntn1P12960 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.72■□□□□ 0.43
Cntn1P12960 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cntn1P12960 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cntn1P12960 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cntn1P12960 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Cntn1P12960 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cntn1P12960 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cntn1P12960 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.71■□□□□ 0.43
Cntn1P12960 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
Cntn1P12960 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.71■□□□□ 0.43
Cntn1P12960 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cntn1P12960 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.71■□□□□ 0.43
Cntn1P12960 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cntn1P12960 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cntn1P12960 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cntn1P12960 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cntn1P12960 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cntn1P12960 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cntn1P12960 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cntn1P12960 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cntn1P12960 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms