Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Gm7143-201ENSMUST00000222811 859 ntBASIC12.81□□□□□ -0.36
Smim1P0C8K7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smim1P0C8K7 Haglr-201ENSMUST00000100000 2085 ntBASIC12.81□□□□□ -0.36
Smim1P0C8K7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Gm8503-201ENSMUST00000118131 455 ntBASIC12.8□□□□□ -0.36
Smim1P0C8K7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Gm7432-201ENSMUST00000210343 879 ntBASIC12.8□□□□□ -0.36
Smim1P0C8K7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smim1P0C8K7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.79□□□□□ -0.36
Smim1P0C8K7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.79□□□□□ -0.36
Smim1P0C8K7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.78□□□□□ -0.36
Smim1P0C8K7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smim1P0C8K7 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.77□□□□□ -0.36
Smim1P0C8K7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim1P0C8K7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim1P0C8K7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Smim1P0C8K7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smim1P0C8K7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Smim1P0C8K7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.77□□□□□ -0.37
Smim1P0C8K7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.77□□□□□ -0.37
Smim1P0C8K7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.77□□□□□ -0.37
Smim1P0C8K7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Smim1P0C8K7 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.76□□□□□ -0.37
Smim1P0C8K7 Gm9806-201ENSMUST00000051080 552 ntBASIC12.76□□□□□ -0.37
Smim1P0C8K7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms