Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.09■□□□□ 0.17
PtcraP0C6B2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PtcraP0C6B2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.08■□□□□ 0.16
PtcraP0C6B2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PtcraP0C6B2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PtcraP0C6B2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PtcraP0C6B2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PtcraP0C6B2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.06■□□□□ 0.16
PtcraP0C6B2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PtcraP0C6B2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Golph3-205ENSMUST00000228671 2842 ntBASIC16.05■□□□□ 0.16
PtcraP0C6B2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.05■□□□□ 0.16
PtcraP0C6B2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PtcraP0C6B2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.04■□□□□ 0.16
PtcraP0C6B2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.04■□□□□ 0.16
PtcraP0C6B2 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.04■□□□□ 0.16
PtcraP0C6B2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PtcraP0C6B2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.03■□□□□ 0.16
PtcraP0C6B2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PtcraP0C6B2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms