Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc1P07903 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc1P07903 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc1P07903 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc1P07903 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.51■□□□□ 0.07
Ercc1P07903 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ercc1P07903 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc1P07903 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc1P07903 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.5■□□□□ 0.07
Ercc1P07903 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.5■□□□□ 0.07
Ercc1P07903 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ercc1P07903 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.5■□□□□ 0.07
Ercc1P07903 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc1P07903 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Ercc1P07903 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Ercc1P07903 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ercc1P07903 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ercc1P07903 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
Ercc1P07903 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.48■□□□□ 0.07
Ercc1P07903 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.48■□□□□ 0.07
Ercc1P07903 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ercc1P07903 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Ercc1P07903 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ercc1P07903 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc1P07903 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.47■□□□□ 0.07
Ercc1P07903 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.47■□□□□ 0.07
Ercc1P07903 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.47■□□□□ 0.07
Ercc1P07903 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
Ercc1P07903 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ercc1P07903 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ercc1P07903 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Ercc1P07903 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ercc1P07903 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ercc1P07903 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Ercc1P07903 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ercc1P07903 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Ercc1P07903 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.46■□□□□ 0.07
Ercc1P07903 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.46■□□□□ 0.07
Ercc1P07903 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.46■□□□□ 0.07
Ercc1P07903 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.46■□□□□ 0.07
Ercc1P07903 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ercc1P07903 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ercc1P07903 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ercc1P07903 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms