Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
P06344 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P06344 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P06344 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P06344 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P06344 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P06344 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.5■□□□□ 0.23
P06344 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.5■□□□□ 0.23
P06344 Gm4968-201ENSMUST00000071458 858 ntBASIC16.5■□□□□ 0.23
P06344 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.5■□□□□ 0.23
P06344 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.5■□□□□ 0.23
P06344 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.5■□□□□ 0.23
P06344 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P06344 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.5■□□□□ 0.23
P06344 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Gm12441-201ENSMUST00000121806 588 ntBASIC16.49■□□□□ 0.23
P06344 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.49■□□□□ 0.23
P06344 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
P06344 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.49■□□□□ 0.23
P06344 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
P06344 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
P06344 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P06344 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
P06344 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
P06344 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
P06344 Gm26524-201ENSMUST00000192339 390 ntBASIC16.48■□□□□ 0.23
P06344 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.48■□□□□ 0.23
P06344 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.48■□□□□ 0.23
P06344 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
P06344 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.48■□□□□ 0.23
P06344 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P06344 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.47■□□□□ 0.23
P06344 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
P06344 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.47■□□□□ 0.23
P06344 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
P06344 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P06344 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.46■□□□□ 0.23
P06344 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Gm27011-201ENSMUST00000182352 972 ntBASIC16.46■□□□□ 0.23
P06344 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
P06344 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
P06344 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P06344 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
P06344 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
P06344 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
P06344 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
P06344 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06344 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
P06344 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.45■□□□□ 0.22
P06344 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.45■□□□□ 0.22
P06344 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms