Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Gm9885-202ENSMUST00000186234 2209 ntBASIC11.75□□□□□ -0.53
P06320 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC11.75□□□□□ -0.53
P06320 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P06320 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P06320 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
P06320 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
P06320 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.75□□□□□ -0.53
P06320 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P06320 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Gm42939-201ENSMUST00000197514 2205 ntBASIC11.75□□□□□ -0.53
P06320 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P06320 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P06320 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC11.74□□□□□ -0.53
P06320 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P06320 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.74□□□□□ -0.53
P06320 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
P06320 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.74□□□□□ -0.53
P06320 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P06320 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P06320 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC11.74□□□□□ -0.53
P06320 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P06320 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06320 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.73□□□□□ -0.53
P06320 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P06320 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11.73□□□□□ -0.53
P06320 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06320 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P06320 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC11.72□□□□□ -0.53
P06320 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC11.72□□□□□ -0.53
P06320 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Gm37811-201ENSMUST00000192416 2601 ntBASIC11.72□□□□□ -0.53
P06320 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.72□□□□□ -0.53
P06320 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P06320 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.72□□□□□ -0.53
P06320 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
P06320 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
P06320 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
P06320 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC11.72□□□□□ -0.53
P06320 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
P06320 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms